[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/mkdir conf3793.dir
<.> /bin/mkdir -p conf3793.dir
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/mkdir -p .
<.> /bin/mkdir -p -p .
[*] cc --version
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc --version -D_FORTIFY_SOURCE=2 -fstack-protector -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include
[*] cc -v
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -v -D_FORTIFY_SOURCE=2 -fstack-protector -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include
[*] cc -V
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -V -D_FORTIFY_SOURCE=2 -fstack-protector -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include
[*] cc -qversion
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -qversion -D_FORTIFY_SOURCE=2 -fstack-protector -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include
[*] cc -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -g -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -g -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -E -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -E -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -E -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -E -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -E -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -E -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -E -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -E -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -E -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -E -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -E -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -E -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c -lm
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -lm -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c -lz -lm
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -lz -lm -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c -lz -lm
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -lz -lm -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c -lbz2 -lz -lm
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -lbz2 -lz -lm -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c -llzma -lbz2 -lz -lm
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -llzma -lbz2 -lz -lm -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c -ldeflate -llzma -lbz2 -lz -lm
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -ldeflate -llzma -lbz2 -lz -lm -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c -lcurl -llzma -lbz2 -lz -lm
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -lcurl -llzma -lbz2 -lz -lm -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c -llzma -lbz2 -lz -lm
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -llzma -lbz2 -lz -lm -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c -llzma -lbz2 -lz -lm
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -llzma -lbz2 -lz -lm -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib conftest.c -lcrypto -llzma -lbz2 -lz -lm
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -o conftest -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -lcrypto -llzma -lbz2 -lz -lm -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 conftest.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -c -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 conftest.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/mkdir conf17557.dir
<.> /bin/mkdir -p conf17557.dir
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/mkdir -p .
<.> /bin/mkdir -p -p .
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] /tmp/pkgbuild/biology/htslib/work/.tools/bin/true
<.> true 
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o kfunc.o kfunc.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o kfunc.o kfunc.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o knetfile.o knetfile.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o knetfile.o knetfile.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o kstring.o kstring.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o kstring.o kstring.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o bcf_sr_sort.o bcf_sr_sort.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o bcf_sr_sort.o bcf_sr_sort.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o bgzf.o bgzf.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o bgzf.o bgzf.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o errmod.o errmod.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o errmod.o errmod.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o faidx.o faidx.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o faidx.o faidx.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o hfile.o hfile.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o hfile.o hfile.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o hfile_net.o hfile_net.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o hfile_net.o hfile_net.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o hts_os.o hts_os.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o hts_os.o hts_os.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o md5.o md5.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o md5.o md5.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o multipart.o multipart.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o multipart.o multipart.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o probaln.o probaln.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o probaln.o probaln.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o realn.o realn.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o realn.o realn.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o regidx.o regidx.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o regidx.o regidx.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o sam.o sam.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o sam.o sam.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o synced_bcf_reader.o synced_bcf_reader.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o synced_bcf_reader.o synced_bcf_reader.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o vcf_sweep.o vcf_sweep.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o vcf_sweep.o vcf_sweep.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o tbx.o tbx.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o tbx.o tbx.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o textutils.o textutils.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o textutils.o textutils.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o thread_pool.o thread_pool.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o thread_pool.o thread_pool.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o vcf.o vcf.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o vcf.o vcf.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o vcfutils.o vcfutils.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o vcfutils.o vcfutils.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/cram_codecs.o cram/cram_codecs.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/cram_codecs.o cram/cram_codecs.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/cram_decode.o cram/cram_decode.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/cram_decode.o cram/cram_decode.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/cram_encode.o cram/cram_encode.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/cram_encode.o cram/cram_encode.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/cram_external.o cram/cram_external.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/cram_external.o cram/cram_external.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/cram_index.o cram/cram_index.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/cram_index.o cram/cram_index.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/cram_io.o cram/cram_io.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/cram_io.o cram/cram_io.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/cram_samtools.o cram/cram_samtools.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/cram_samtools.o cram/cram_samtools.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/cram_stats.o cram/cram_stats.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/cram_stats.o cram/cram_stats.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/files.o cram/files.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/files.o cram/files.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/mFILE.o cram/mFILE.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/mFILE.o cram/mFILE.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/open_trace_file.o cram/open_trace_file.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/open_trace_file.o cram/open_trace_file.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/pooled_alloc.o cram/pooled_alloc.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/pooled_alloc.o cram/pooled_alloc.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/rANS_static.o cram/rANS_static.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/rANS_static.o cram/rANS_static.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/sam_header.o cram/sam_header.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/sam_header.o cram/sam_header.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o cram/string_alloc.o cram/string_alloc.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o cram/string_alloc.o cram/string_alloc.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o hfile_libcurl.o hfile_libcurl.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o hfile_libcurl.o hfile_libcurl.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o hfile_gcs.o hfile_gcs.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o hfile_gcs.o hfile_gcs.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o hfile_s3.o hfile_s3.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o hfile_s3.o hfile_s3.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o kfunc.pico kfunc.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o kfunc.pico kfunc.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o knetfile.pico knetfile.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o knetfile.pico knetfile.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o kstring.pico kstring.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o kstring.pico kstring.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o bcf_sr_sort.pico bcf_sr_sort.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o bcf_sr_sort.pico bcf_sr_sort.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o bgzf.pico bgzf.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o bgzf.pico bgzf.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o errmod.pico errmod.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o errmod.pico errmod.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o faidx.pico faidx.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o faidx.pico faidx.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o hfile.pico hfile.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o hfile.pico hfile.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o hfile_net.pico hfile_net.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o hfile_net.pico hfile_net.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o hts.pico hts.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o hts.pico hts.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o hts_os.pico hts_os.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o hts_os.pico hts_os.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o md5.pico md5.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o md5.pico md5.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o multipart.pico multipart.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o multipart.pico multipart.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o probaln.pico probaln.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o probaln.pico probaln.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o realn.pico realn.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o realn.pico realn.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o regidx.pico regidx.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o regidx.pico regidx.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o sam.pico sam.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o sam.pico sam.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o synced_bcf_reader.pico synced_bcf_reader.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o synced_bcf_reader.pico synced_bcf_reader.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o vcf_sweep.pico vcf_sweep.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o vcf_sweep.pico vcf_sweep.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o tbx.pico tbx.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o tbx.pico tbx.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o textutils.pico textutils.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o textutils.pico textutils.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o thread_pool.pico thread_pool.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o thread_pool.pico thread_pool.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o vcf.pico vcf.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o vcf.pico vcf.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o vcfutils.pico vcfutils.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o vcfutils.pico vcfutils.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/cram_codecs.pico cram/cram_codecs.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/cram_codecs.pico cram/cram_codecs.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/cram_decode.pico cram/cram_decode.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/cram_decode.pico cram/cram_decode.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/cram_encode.pico cram/cram_encode.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/cram_encode.pico cram/cram_encode.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/cram_external.pico cram/cram_external.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/cram_external.pico cram/cram_external.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/cram_index.pico cram/cram_index.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/cram_index.pico cram/cram_index.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/cram_io.pico cram/cram_io.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/cram_io.pico cram/cram_io.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/cram_samtools.pico cram/cram_samtools.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/cram_samtools.pico cram/cram_samtools.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/cram_stats.pico cram/cram_stats.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/cram_stats.pico cram/cram_stats.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/files.pico cram/files.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/files.pico cram/files.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/mFILE.pico cram/mFILE.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/mFILE.pico cram/mFILE.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/open_trace_file.pico cram/open_trace_file.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/open_trace_file.pico cram/open_trace_file.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/pooled_alloc.pico cram/pooled_alloc.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/pooled_alloc.pico cram/pooled_alloc.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/rANS_static.pico cram/rANS_static.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/rANS_static.pico cram/rANS_static.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/sam_header.pico cram/sam_header.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/sam_header.pico cram/sam_header.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o cram/string_alloc.pico cram/string_alloc.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o cram/string_alloc.pico cram/string_alloc.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o hfile_libcurl.pico hfile_libcurl.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o hfile_libcurl.pico hfile_libcurl.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o hfile_gcs.pico hfile_gcs.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o hfile_gcs.pico hfile_gcs.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -fpic -c -o hfile_s3.pico hfile_s3.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -fpic -c -o hfile_s3.pico hfile_s3.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o bgzip.o bgzip.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o bgzip.o bgzip.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o htsfile.o htsfile.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o htsfile.o htsfile.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o tabix.o tabix.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o tabix.o tabix.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o test/hts_endian.o test/hts_endian.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o test/hts_endian.o test/hts_endian.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o test/fieldarith.o test/fieldarith.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o test/fieldarith.o test/fieldarith.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o test/hfile.o test/hfile.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o test/hfile.o test/hfile.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o test/sam.o test/sam.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o test/sam.o test/sam.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o test/test_bgzf.o test/test_bgzf.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o test/test_bgzf.o test/test_bgzf.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o test/test_realn.o test/test_realn.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o test/test_realn.o test/test_realn.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o test/test-regidx.o test/test-regidx.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o test/test-regidx.o test/test-regidx.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o test/test_view.o test/test_view.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o test/test_view.o test/test_view.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o test/test-vcf-api.o test/test-vcf-api.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o test/test-vcf-api.o test/test-vcf-api.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o test/test-vcf-sweep.o test/test-vcf-sweep.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o test/test-vcf-sweep.o test/test-vcf-sweep.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o test/test-bcf-sr.o test/test-bcf-sr.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o test/test-bcf-sr.o test/test-bcf-sr.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o test/test-bcf-translate.o test/test-bcf-translate.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o test/test-bcf-translate.o test/test-bcf-translate.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -I. -I/usr/include -I/usr/pkg/include -I/usr/include/krb5 -c -o hts.o hts.c
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -Wall -O2 -D_FORTIFY_SOURCE=2 -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include -I/usr/include/krb5 -I. -c -o hts.o hts.c -D_FORTIFY_SOURCE=2 -fstack-protector
[*] cc -shared -Wl,-soname,libhts.so.2 -L/usr/lib -Wl,-R/usr/lib -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -o libhts.so kfunc.pico knetfile.pico kstring.pico bcf_sr_sort.pico bgzf.pico errmod.pico faidx.pico hfile.pico hfile_net.pico hts.pico hts_os.pico md5.pico multipart.pico probaln.pico realn.pico regidx.pico sam.pico synced_bcf_reader.pico vcf_sweep.pico tbx.pico textutils.pico thread_pool.pico vcf.pico vcfutils.pico cram/cram_codecs.pico cram/cram_decode.pico cram/cram_encode.pico cram/cram_external.pico cram/cram_index.pico cram/cram_io.pico cram/cram_samtools.pico cram/cram_stats.pico cram/files.pico cram/mFILE.pico cram/open_trace_file.pico cram/pooled_alloc.pico cram/rANS_static.pico cram/sam_header.pico cram/string_alloc.pico hfile_libcurl.pico hfile_gcs.pico hfile_s3.pico -llzma -lbz2 -lz -lm -lcurl -lcrypto -lpthread
<.> /tmp/pkgbuild/biology/htslib/work/.gcc/bin/gcc -shared -Wl,-soname -Wl,libhts.so.2 -L/tmp/pkgbuild/biology/htslib/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib -o libhts.so kfunc.pico knetfile.pico kstring.pico bcf_sr_sort.pico bgzf.pico errmod.pico faidx.pico hfile.pico hfile_net.pico hts.pico hts_os.pico md5.pico multipart.pico probaln.pico realn.pico regidx.pico sam.pico synced_bcf_reader.pico vcf_sweep.pico tbx.pico textutils.pico thread_pool.pico vcf.pico vcfutils.pico cram/cram_codecs.pico cram/cram_decode.pico cram/cram_encode.pico cram/cram_external.pico cram/cram_index.pico cram/cram_io.pico cram/cram_samtools.pico cram/cram_stats.pico cram/files.pico cram/mFILE.pico cram/open_trace_file.pico cram/pooled_alloc.pico cram/rANS_static.pico cram/sam_header.pico cram/string_alloc.pico hfile_libcurl.pico hfile_gcs.pico hfile_s3.pico -llzma -lbz2 -lz -lm -lcurl -lcrypto -lpthread -D_FORTIFY_SOURCE=2 -fstack-protector -I/tmp/pkgbuild/biology/htslib/work/.buildlink/include